Canon shows him apparently getting many of his memories back by the end of the first couple of episodes after he comes back... by the end of their big mission to Kelowna he tells Jonas he's pretty much remembered everything.
Whether you BELIEVE that, is of course, up to you!!!
ETA: IMHO canon really underplayed the whole amnesia thing. They could have a done a lot with it.
It's basically muzzily handwaved in the first few episodes - very much comes across as a "it was a good idea at first but quickly became a bloody nuisance to write".
Fanfic does it better, say it as I probably shouldn't (and okay, sometimes fanfic does it worse... but not much!)
I believe the answer is: consult a magic 8 ball. Because Daniel Jackson is a contrary bitch and pretended he did NOT have his memories back for Officially Too Long
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(I'm still so upset about Janet.)
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Whether you BELIEVE that, is of course, up to you!!!
ETA: IMHO canon really underplayed the whole amnesia thing. They could have a done a lot with it.
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Fanfic does it better, say it as I probably shouldn't (and okay, sometimes fanfic does it worse... but not much!)
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